BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E09SP1|AL427028
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1008 1785 0.0
>3x_Contig1008
Length = 3861
Score = 1785 bits (897), Expect = 0.0
Identities = 909/915 (99%), Gaps = 1/915 (0%)
Strand = Plus / Plus
Query: 1 gatcacaattctttatcccaaaaaatctgtcgcatgtctctgtttgaattatgggtagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gatcacaattctttatcccaaaaaatctgtcgcatgtctctgtttgaattatgggtagct 648
Query: 61 gaaaccagtaagaaagaattcaagatgaaaaaatcagagaattgggcacgtacatgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaaaccagtaagaaagaattcaagatgaaaaaatcagagaattgggcacgtacatgattt 708
Query: 121 cattaccctgtggtcattaaagtagataacagttcttaatcagcgacaggcgagtcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cattaccctgtggtcattaaagtagataacagttcttaatcagcgacaggcgagtcttac 768
Query: 181 tgtatcttatttattctctctttaaatacatgaaacaaaaaagtcataaattatccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tgtatcttatttattctctctttaaatacatgaaacaaaaaagtcataaattatccatca 828
Query: 241 acaatattcgtctttcatctccaatcgcattataacggataaaaacaatcagaaccattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 acaatattcgtctttcatctccaatcgcattataacggataaaaacaatcagaaccattg 888
Query: 301 cacgcaaagaatagtggataagtggtctacacgagactcaatgtatcgaaaaaatcacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 cacgcaaagaatagtggataagtggtctacacgagactcaatgtatcgaaaaaatcacta 948
Query: 361 gaagtaactttggaactgtttactgaacttctaccccttgccttaccccatttatatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 gaagtaactttggaactgtttactgaacttctaccccttgccttaccccatttatatcat 1008
Query: 421 aacttttttgatcttttacatcatctaatccagagtaatgagccgatttgccaaggcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 aacttttttgatcttttacatcatctaatccagagtaatgagccgatttgccaaggcatc 1068
Query: 481 gctgccactactagagataacagaacttttacaaaagggtttaccaaaggagccattcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 gctgccactactagagataacagaacttttacaaaagggtttaccaaaggagccattcaa 1128
Query: 541 tgcaactttgcgagatttcatagagtggaacaatctaaccaatttgcggag-cataattk 599
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1129 tgcaactttgcgagatttcatagagtggaacaatctaaccaatttgcggagccataattt 1188
Query: 600 tbkcactaagaaatctgcagcccaaataaatgaagttaataggttacaaccggtattatc 659
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 tttcactaagaaatctgcagcccaaataaatgaagttaataggttacaaccggtattatc 1248
Query: 660 tcattgcttcgcacgttggttgcacgttgaatacaagctcaactattatccttatkacga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1249 tcattgcttcgcacgttggttgcacgttgaatacaagctcaactattatccttattacga 1308
Query: 720 tcttaatgttgtgtgcttatacactgatctaaatgctggcattgaaaatgcaaagcatgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 tcttaatgttgtgtgcttatacactgatctaaatgctggcattgaaaatgcaaagcatgt 1368
Query: 780 agtaaattatttcaagaaatttgtgaccgatgatgtatatgacagattaaactactactt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 agtaaattatttcaagaaatttgtgaccgatgatgtatatgacagattaaactactactt 1428
Query: 840 ggtaccactttatgataccaaaattgacgcaatgactaaragcacaaatgatccaaagat 899
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1429 ggtaccactttatgataccaaaattgacgcaatgactaaaagcacaaatgatccaaagat 1488
Query: 900 acgaataatgaaaga 914
|||||||||||||||
Sbjct: 1489 acgaataatgaaaga 1503
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7112
Number of Sequences: 1807
Number of extensions: 7112
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)